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Cluster: Rep_2406_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2406_c_208 Rep_2406_c_208_11 8752 9504 - 3.A.1.3.14
TC Rep_2406_c_208 Rep_2406_c_208_12 9524 10222 - 3.A.1.3.14
NULL(UNKNOWN) Rep_2406_c_208 Rep_2406_c_208_13 10239 10784 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2406_c_208 Rep_2406_c_208_14 10884 11771 - 3.A.1.3.14
TC Rep_2406_c_208 Rep_2406_c_208_15 12010 12426 - 2.A.7.2.1
pfam Rep_2406_c_208 Rep_2406_c_208_16 12515 13741 - AAA_14 | DUF4143
pfam Rep_2406_c_208 Rep_2406_c_208_17 13805 14509 - Lipase_GDSL | Lipase_GDSL_2
CAZyme Rep_2406_c_208 Rep_2406_c_208_18 14557 16113 - GH32
Gene ID: Rep_2406_c_208_11
Type: TC
Location: 8752 - 9504 (-)
Gene ID: Rep_2406_c_208_12
Type: TC
Location: 9524 - 10222 (-)
Gene ID: Rep_2406_c_208_13
Type:
Location: 10239 - 10784 (-)
Gene ID: Rep_2406_c_208_14
Type: TC
Location: 10884 - 11771 (-)
Gene ID: Rep_2406_c_208_15
Type: TC
Location: 12010 - 12426 (-)
Gene ID: Rep_2406_c_208_16
Type: pfam
Location: 12515 - 13741 (-)
Gene ID: Rep_2406_c_208_17
Type: pfam
Location: 13805 - 14509 (-)
Gene ID: Rep_2406_c_208_18
Type: CAZyme
Location: 14557 - 16113 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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