Cluster: Rep_2406_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2406_c_207 | Rep_2406_c_207_2 | 438 | 3728 | - | GH38 |
| TC | Rep_2406_c_207 | Rep_2406_c_207_3 | 3814 | 4641 | - | 3.A.1.29.1 |
| TC | Rep_2406_c_207 | Rep_2406_c_207_4 | 4638 | 5876 | - | 3.A.1.29.1 |
| TC | Rep_2406_c_207 | Rep_2406_c_207_5 | 5973 | 6359 | + | 3.A.1.29.1 |
Gene ID: Rep_2406_c_207_2
Type: CAZyme
Location: 438 - 3728 (-)
Type: CAZyme
Location: 438 - 3728 (-)
Gene ID: Rep_2406_c_207_3
Type: TC
Location: 3814 - 4641 (-)
Type: TC
Location: 3814 - 4641 (-)
Gene ID: Rep_2406_c_207_4
Type: TC
Location: 4638 - 5876 (-)
Type: TC
Location: 4638 - 5876 (-)
Gene ID: Rep_2406_c_207_5
Type: TC
Location: 5973 - 6359 (+)
Type: TC
Location: 5973 - 6359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.