Cluster: Rep_2406_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_195 | Rep_2406_c_195_3 | 2536 | 3936 | - | 9.B.18.1.1 |
| CAZyme | Rep_2406_c_195 | Rep_2406_c_195_4 | 3943 | 4971 | - | GT2 |
| CAZyme | Rep_2406_c_195 | Rep_2406_c_195_5 | 4973 | 6862 | - | GT2 | GT2 |
Gene ID: Rep_2406_c_195_3
Type: TC
Location: 2536 - 3936 (-)
Type: TC
Location: 2536 - 3936 (-)
Gene ID: Rep_2406_c_195_4
Type: CAZyme
Location: 3943 - 4971 (-)
Type: CAZyme
Location: 3943 - 4971 (-)
Gene ID: Rep_2406_c_195_5
Type: CAZyme
Location: 4973 - 6862 (-)
Type: CAZyme
Location: 4973 - 6862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.