Cluster: Rep_2406_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_30 | Rep_2406_c_30_1 | 1 | 639 | + | 2.A.59.1.6 |
| pfam | Rep_2406_c_30 | Rep_2406_c_30_2 | 668 | 895 | + | Thioredoxin_3 |
| CAZyme | Rep_2406_c_30 | Rep_2406_c_30_3 | 1203 | 2498 | + | GH27 |
Gene ID: Rep_2406_c_30_1
Type: TC
Location: 1 - 639 (+)
Type: TC
Location: 1 - 639 (+)
Gene ID: Rep_2406_c_30_2
Type: pfam
Location: 668 - 895 (+)
Type: pfam
Location: 668 - 895 (+)
Gene ID: Rep_2406_c_30_3
Type: CAZyme
Location: 1203 - 2498 (+)
Type: CAZyme
Location: 1203 - 2498 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.