Cluster: Rep_2402_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2402
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2402_c_49 | Rep_2402_c_49_25 | 24103 | 25554 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | Rep_2402_c_49 | Rep_2402_c_49_26 | 25563 | 26483 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2402_c_49 | Rep_2402_c_49_27 | 26476 | 27660 | + | Acyl_transf_3 |
| TC | Rep_2402_c_49 | Rep_2402_c_49_28 | 27647 | 28678 | + | 9.B.97.6.2 |
| CAZyme | Rep_2402_c_49 | Rep_2402_c_49_29 | 28681 | 29643 | + | GT2 |
Gene ID: Rep_2402_c_49_25
Type: TC
Location: 24103 - 25554 (+)
Type: TC
Location: 24103 - 25554 (+)
Gene ID: Rep_2402_c_49_26
Type:
Location: 25563 - 26483 (+)
Type:
Location: 25563 - 26483 (+)
Gene ID: Rep_2402_c_49_27
Type: pfam
Location: 26476 - 27660 (+)
Type: pfam
Location: 26476 - 27660 (+)
Gene ID: Rep_2402_c_49_28
Type: TC
Location: 27647 - 28678 (+)
Type: TC
Location: 27647 - 28678 (+)
Gene ID: Rep_2402_c_49_29
Type: CAZyme
Location: 28681 - 29643 (+)
Type: CAZyme
Location: 28681 - 29643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11237
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.