PROTEIN: Rep_2402_c_49_26
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Protein File & Metadata
Source:
Rep_2402_c_49_26.pdb
Genome ID:
Protein ID:
Rep_2402_c_49_26
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Protein Sequence
MKKYMKAAAV GLFIALCFLG VKNFIAYKFP NSSNGMQAAI RQGRIEHLFM GSSLFRQGID 60 IYTAEDMLEG NSFVLSYNGN QPVQMLEELK MLLRNDVKID NLYMDLYVYS SALRPAISDT 120 RLIWDLDFQG KCNIYQDMVT YSEAGLSEFV DFYITSNNQY MIMYPIFNVV MEKEFYQGGN 180 IRETSGSTRE ILDNLGTPGD REGIDKTQKA ALLEIIDICK EEDIQIYFAE VPKYYTLDEA 240 DYYVRLRSEL EAVVAEERII RASELSFDNR NPAYYQDLFH LSGEGRRTYT KLLLEAVAEA 300 KEENGE 306
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25527-F1-model_v4 | 1 | 303 | 4 | 340 | 0.6429 |
0.7262 |
| AF-Q2FZW3-F1-model_v4 | 1 | 304 | 1 | 386 | 0.5607 |
0.6569 |
| AF-A0A132P6N8-F1-model_v4 | 14 | 306 | 16 | 398 | 0.551 |
0.6792 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3G8RBC6-F1-model_v4 | GT4 | 3 | 299 | 656 | 971 | 0.4727 |
0.7437 |
| WAG42763.1 | GT2 | 10 | 301 | 760 | 1111 | 0.4496 |
0.7412 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3G8RBC6 | GT4 | 3 | 299 | 656 | 971 | 0.4727 |
0.7437 |
| WAG42763.1 | GT2 | 10 | 301 | 760 | 1111 | 0.4496 |
0.7412 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6o93-assembly1.cif.gz_A | 29 | 306 | 7 | 369 | 0.5587 |
0.7012 |
| 6pfx-assembly1.cif.gz_A | 29 | 306 | 5 | 361 | 0.5548 |
0.69 |
| 6pfx-assembly2.cif.gz_B | 30 | 306 | 7 | 359 | 0.5541 |
0.6899 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.