Cluster: Rep_2368_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2368
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_2299 | 2466125 | 2467744 | - | CBM2 | GH5_2 |
| STP | Rep_2368_c_7 | Rep_2368_c_7_2300 | 2467832 | 2469184 | - | Citrate_synt |
| TC | Rep_2368_c_7 | Rep_2368_c_7_2301 | 2469220 | 2470584 | - | 2.A.66.1.32 |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_2302 | 2470816 | 2472651 | - | GH2 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_2303 | 2472686 | 2474086 | - | 2.A.2.3.1 |
Gene ID: Rep_2368_c_7_2299
Type: CAZyme
Location: 2466125 - 2467744 (-)
Type: CAZyme
Location: 2466125 - 2467744 (-)
Gene ID: Rep_2368_c_7_2300
Type: STP
Location: 2467832 - 2469184 (-)
Type: STP
Location: 2467832 - 2469184 (-)
Gene ID: Rep_2368_c_7_2301
Type: TC
Location: 2469220 - 2470584 (-)
Type: TC
Location: 2469220 - 2470584 (-)
Gene ID: Rep_2368_c_7_2302
Type: CAZyme
Location: 2470816 - 2472651 (-)
Type: CAZyme
Location: 2470816 - 2472651 (-)
Gene ID: Rep_2368_c_7_2303
Type: TC
Location: 2472686 - 2474086 (-)
Type: TC
Location: 2472686 - 2474086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.