Cluster: Rep_2368_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2368
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2368_c_7 | Rep_2368_c_7_2231 | 2393294 | 2394196 | - | 3.A.1.1.36 |
| TC | Rep_2368_c_7 | Rep_2368_c_7_2232 | 2394198 | 2395148 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | Rep_2368_c_7 | Rep_2368_c_7_2233 | 2395237 | 2396592 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2368_c_7 | Rep_2368_c_7_2234 | 2396625 | 2397623 | - | LacI |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_2235 | 2397898 | 2400351 | + | GH94 |
| CAZyme | Rep_2368_c_7 | Rep_2368_c_7_2236 | 2400375 | 2401760 | + | GH1 |
Gene ID: Rep_2368_c_7_2231
Type: TC
Location: 2393294 - 2394196 (-)
Type: TC
Location: 2393294 - 2394196 (-)
Gene ID: Rep_2368_c_7_2232
Type: TC
Location: 2394198 - 2395148 (-)
Type: TC
Location: 2394198 - 2395148 (-)
Gene ID: Rep_2368_c_7_2233
Type:
Location: 2395237 - 2396592 (-)
Type:
Location: 2395237 - 2396592 (-)
Gene ID: Rep_2368_c_7_2234
Type: TF
Location: 2396625 - 2397623 (-)
Type: TF
Location: 2396625 - 2397623 (-)
Gene ID: Rep_2368_c_7_2235
Type: CAZyme
Location: 2397898 - 2400351 (+)
Type: CAZyme
Location: 2397898 - 2400351 (+)
Gene ID: Rep_2368_c_7_2236
Type: CAZyme
Location: 2400375 - 2401760 (+)
Type: CAZyme
Location: 2400375 - 2401760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira eligens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.