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Cluster: Rep_2368_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2368_c_7 Rep_2368_c_7_1002 1072229 1074124 + 3.A.3.6.10
TF Rep_2368_c_7 Rep_2368_c_7_1003 1074141 1074500 + HTH_5
pfam Rep_2368_c_7 Rep_2368_c_7_1004 1074850 1075755 + NadA
TC Rep_2368_c_7 Rep_2368_c_7_1005 1075791 1077128 + 3.D.10.1.4
pfam Rep_2368_c_7 Rep_2368_c_7_1006 1077151 1078011 + QRPTase_C | QRPTase_N
TF Rep_2368_c_7 Rep_2368_c_7_1007 1078044 1078589 + HTH_11
CAZyme Rep_2368_c_7 Rep_2368_c_7_1008 1078592 1079656 + GT111
Gene ID: Rep_2368_c_7_1002
Type: TC
Location: 1072229 - 1074124 (+)
Gene ID: Rep_2368_c_7_1003
Type: TF
Location: 1074141 - 1074500 (+)
Gene ID: Rep_2368_c_7_1004
Type: pfam
Location: 1074850 - 1075755 (+)
Gene ID: Rep_2368_c_7_1005
Type: TC
Location: 1075791 - 1077128 (+)
Gene ID: Rep_2368_c_7_1006
Type: pfam
Location: 1077151 - 1078011 (+)
Gene ID: Rep_2368_c_7_1007
Type: TF
Location: 1078044 - 1078589 (+)
Gene ID: Rep_2368_c_7_1008
Type: CAZyme
Location: 1078592 - 1079656 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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