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Cluster: Rep_2368_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2368_c_7 Rep_2368_c_7_805 887289 887684 + 1.E.14.1.3
TC Rep_2368_c_7 Rep_2368_c_7_806 887677 888369 + 2.A.122.1.6
TC Rep_2368_c_7 Rep_2368_c_7_807 888388 888963 + 2.A.115.2.14
TF Rep_2368_c_7 Rep_2368_c_7_808 888980 889660 + GntR
pfam Rep_2368_c_7 Rep_2368_c_7_809 889684 890334 + Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme Rep_2368_c_7 Rep_2368_c_7_810 890340 891293 - CE12
Gene ID: Rep_2368_c_7_805
Type: TC
Location: 887289 - 887684 (+)
Gene ID: Rep_2368_c_7_806
Type: TC
Location: 887677 - 888369 (+)
Gene ID: Rep_2368_c_7_807
Type: TC
Location: 888388 - 888963 (+)
Gene ID: Rep_2368_c_7_808
Type: TF
Location: 888980 - 889660 (+)
Gene ID: Rep_2368_c_7_809
Type: pfam
Location: 889684 - 890334 (+)
Gene ID: Rep_2368_c_7_810
Type: CAZyme
Location: 890340 - 891293 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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