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Cluster: Rep_2368_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2368_c_7 Rep_2368_c_7_749 821624 822256 + 3.A.1.124.6
peptidase Rep_2368_c_7 Rep_2368_c_7_750 822302 823735 - S12.UPW
TC Rep_2368_c_7 Rep_2368_c_7_751 823896 825065 + 2.A.4.7.6
sulfatase Rep_2368_c_7 Rep_2368_c_7_752 825066 825794 - S1_2
pfam Rep_2368_c_7 Rep_2368_c_7_753 826403 826930 + Ribosomal_S30AE | Ribosom_S30AE_C
TC Rep_2368_c_7 Rep_2368_c_7_754 827128 829695 + 3.A.5.1.3
pfam Rep_2368_c_7 Rep_2368_c_7_755 829766 830884 + RF-1 | PCRF
STP Rep_2368_c_7 Rep_2368_c_7_756 830904 831404 + CheW
CAZyme Rep_2368_c_7 Rep_2368_c_7_757 831397 833013 + GH77
Gene ID: Rep_2368_c_7_749
Type: TC
Location: 821624 - 822256 (+)
Gene ID: Rep_2368_c_7_750
Type: peptidase
Location: 822302 - 823735 (-)
Gene ID: Rep_2368_c_7_751
Type: TC
Location: 823896 - 825065 (+)
Gene ID: Rep_2368_c_7_752
Type: sulfatase
Location: 825066 - 825794 (-)
Gene ID: Rep_2368_c_7_753
Type: pfam
Location: 826403 - 826930 (+)
Gene ID: Rep_2368_c_7_754
Type: TC
Location: 827128 - 829695 (+)
Gene ID: Rep_2368_c_7_755
Type: pfam
Location: 829766 - 830884 (+)
Gene ID: Rep_2368_c_7_756
Type: STP
Location: 830904 - 831404 (+)
Gene ID: Rep_2368_c_7_757
Type: CAZyme
Location: 831397 - 833013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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