Cluster: Rep_231_CGC49
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2855 | 3471149 | 3472255 | - | GT28 |
| TC | Rep_231_c_0 | Rep_231_c_0_2856 | 3472347 | 3473624 | - | 2.A.103.1.2 |
| pfam | Rep_231_c_0 | Rep_231_c_0_2857 | 3473663 | 3475000 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | Rep_231_c_0 | Rep_231_c_0_2858 | 3475044 | 3476312 | - | 9.B.146.1.3 |
Gene ID: Rep_231_c_0_2855
Type: CAZyme
Location: 3471149 - 3472255 (-)
Type: CAZyme
Location: 3471149 - 3472255 (-)
Gene ID: Rep_231_c_0_2856
Type: TC
Location: 3472347 - 3473624 (-)
Type: TC
Location: 3472347 - 3473624 (-)
Gene ID: Rep_231_c_0_2857
Type: pfam
Location: 3473663 - 3475000 (-)
Type: pfam
Location: 3473663 - 3475000 (-)
Gene ID: Rep_231_c_0_2858
Type: TC
Location: 3475044 - 3476312 (-)
Type: TC
Location: 3475044 - 3476312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.