Cluster: Rep_231_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2454 | 2953891 | 2954667 | - | GT2 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2455 | 2954664 | 2955932 | - | GT4 |
| pfam | Rep_231_c_0 | Rep_231_c_0_2456 | 2956448 | 2956927 | - | YgbB |
| TC | Rep_231_c_0 | Rep_231_c_0_2457 | 2956965 | 2958149 | - | 1.B.57.4.6 |
Gene ID: Rep_231_c_0_2454
Type: CAZyme
Location: 2953891 - 2954667 (-)
Type: CAZyme
Location: 2953891 - 2954667 (-)
Gene ID: Rep_231_c_0_2455
Type: CAZyme
Location: 2954664 - 2955932 (-)
Type: CAZyme
Location: 2954664 - 2955932 (-)
Gene ID: Rep_231_c_0_2456
Type: pfam
Location: 2956448 - 2956927 (-)
Type: pfam
Location: 2956448 - 2956927 (-)
Gene ID: Rep_231_c_0_2457
Type: TC
Location: 2956965 - 2958149 (-)
Type: TC
Location: 2956965 - 2958149 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.