Cluster: Rep_231_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2424 | 2923989 | 2924870 | - | GT14 |
| pfam | Rep_231_c_0 | Rep_231_c_0_2425 | 2925099 | 2926436 | + | DUF6080 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2426 | 2926484 | 2927458 | + | GT2 |
| TC | Rep_231_c_0 | Rep_231_c_0_2427 | 2927394 | 2928830 | - | 2.A.66.2.6 |
Gene ID: Rep_231_c_0_2424
Type: CAZyme
Location: 2923989 - 2924870 (-)
Type: CAZyme
Location: 2923989 - 2924870 (-)
Gene ID: Rep_231_c_0_2425
Type: pfam
Location: 2925099 - 2926436 (+)
Type: pfam
Location: 2925099 - 2926436 (+)
Gene ID: Rep_231_c_0_2426
Type: CAZyme
Location: 2926484 - 2927458 (+)
Type: CAZyme
Location: 2926484 - 2927458 (+)
Gene ID: Rep_231_c_0_2427
Type: TC
Location: 2927394 - 2928830 (-)
Type: TC
Location: 2927394 - 2928830 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.