Cluster: Rep_231_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2295 | 2708379 | 2709530 | - | GH16_3 |
| NULL(UNKNOWN) | Rep_231_c_0 | Rep_231_c_0_2296 | 2709620 | 2711020 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_231_c_0 | Rep_231_c_0_2297 | 2711039 | 2712565 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_231_c_0 | Rep_231_c_0_2298 | 2712594 | 2715857 | - | 1.B.14.6.1 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2299 | 2716409 | 2718673 | + | GH3 |
| pfam | Rep_231_c_0 | Rep_231_c_0_2300 | 2719063 | 2720982 | - | DUF6377 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_2301 | 2721048 | 2723417 | + | GH3 |
Gene ID: Rep_231_c_0_2295
Type: CAZyme
Location: 2708379 - 2709530 (-)
Type: CAZyme
Location: 2708379 - 2709530 (-)
Gene ID: Rep_231_c_0_2296
Type:
Location: 2709620 - 2711020 (-)
Type:
Location: 2709620 - 2711020 (-)
Gene ID: Rep_231_c_0_2297
Type: pfam
Location: 2711039 - 2712565 (-)
Type: pfam
Location: 2711039 - 2712565 (-)
Gene ID: Rep_231_c_0_2298
Type: TC
Location: 2712594 - 2715857 (-)
Type: TC
Location: 2712594 - 2715857 (-)
Gene ID: Rep_231_c_0_2299
Type: CAZyme
Location: 2716409 - 2718673 (+)
Type: CAZyme
Location: 2716409 - 2718673 (+)
Gene ID: Rep_231_c_0_2300
Type: pfam
Location: 2719063 - 2720982 (-)
Type: pfam
Location: 2719063 - 2720982 (-)
Gene ID: Rep_231_c_0_2301
Type: CAZyme
Location: 2721048 - 2723417 (+)
Type: CAZyme
Location: 2721048 - 2723417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.