Cluster: Rep_231_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_1969 | 2301390 | 2303480 | + | 3.A.16.1.1 |
| pfam | Rep_231_c_0 | Rep_231_c_0_1970 | 2303492 | 2304358 | + | CTP_transf_1 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1971 | 2304514 | 2305467 | - | GH5_2 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1972 | 2305622 | 2307085 | - | GT19 |
Gene ID: Rep_231_c_0_1969
Type: TC
Location: 2301390 - 2303480 (+)
Type: TC
Location: 2301390 - 2303480 (+)
Gene ID: Rep_231_c_0_1970
Type: pfam
Location: 2303492 - 2304358 (+)
Type: pfam
Location: 2303492 - 2304358 (+)
Gene ID: Rep_231_c_0_1971
Type: CAZyme
Location: 2304514 - 2305467 (-)
Type: CAZyme
Location: 2304514 - 2305467 (-)
Gene ID: Rep_231_c_0_1972
Type: CAZyme
Location: 2305622 - 2307085 (-)
Type: CAZyme
Location: 2305622 - 2307085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.