Cluster: Rep_231_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_1952 | 2275183 | 2278149 | - | 1.B.14.6.1 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1953 | 2278446 | 2281346 | - | GH146 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1954 | 2281625 | 2283610 | + | GH97 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1955 | 2283633 | 2286086 | + | CBM32 | GH43_34 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1956 | 2286098 | 2288572 | + | GH127 |
Gene ID: Rep_231_c_0_1952
Type: TC
Location: 2275183 - 2278149 (-)
Type: TC
Location: 2275183 - 2278149 (-)
Gene ID: Rep_231_c_0_1953
Type: CAZyme
Location: 2278446 - 2281346 (-)
Type: CAZyme
Location: 2278446 - 2281346 (-)
Gene ID: Rep_231_c_0_1954
Type: CAZyme
Location: 2281625 - 2283610 (+)
Type: CAZyme
Location: 2281625 - 2283610 (+)
Gene ID: Rep_231_c_0_1955
Type: CAZyme
Location: 2283633 - 2286086 (+)
Type: CAZyme
Location: 2283633 - 2286086 (+)
Gene ID: Rep_231_c_0_1956
Type: CAZyme
Location: 2286098 - 2288572 (+)
Type: CAZyme
Location: 2286098 - 2288572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_231_c_0_1953 | vegetarian > vegan | 1.21974 | 0.00951 |