Cluster: Rep_231_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_154 | 180048 | 181379 | + | CBM6 | GH43_29 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_155 | 181480 | 183864 | + | GH146 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_156 | 184040 | 187012 | + | CBM6 | CBM91 | GH43_10 | GH43_29 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_157 | 186960 | 189422 | + | GH95 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_158 | 189541 | 191679 | + | CBM91 | GH43_10 |
| TC | Rep_231_c_0 | Rep_231_c_0_159 | 191762 | 192508 | - | 1.B.44.1.2 |
Gene ID: Rep_231_c_0_154
Type: CAZyme
Location: 180048 - 181379 (+)
Type: CAZyme
Location: 180048 - 181379 (+)
Gene ID: Rep_231_c_0_155
Type: CAZyme
Location: 181480 - 183864 (+)
Type: CAZyme
Location: 181480 - 183864 (+)
Gene ID: Rep_231_c_0_156
Type: CAZyme
Location: 184040 - 187012 (+)
Type: CAZyme
Location: 184040 - 187012 (+)
Gene ID: Rep_231_c_0_157
Type: CAZyme
Location: 186960 - 189422 (+)
Type: CAZyme
Location: 186960 - 189422 (+)
Gene ID: Rep_231_c_0_158
Type: CAZyme
Location: 189541 - 191679 (+)
Type: CAZyme
Location: 189541 - 191679 (+)
Gene ID: Rep_231_c_0_159
Type: TC
Location: 191762 - 192508 (-)
Type: TC
Location: 191762 - 192508 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.