Cluster: Rep_231_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_1348 | 1594103 | 1594819 | + | 3.A.1.140.1 |
| pfam | Rep_231_c_0 | Rep_231_c_0_1349 | 1594847 | 1596169 | + | AA_kinase | ACT_9 |
| pfam | Rep_231_c_0 | Rep_231_c_0_1350 | 1596309 | 1597466 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1351 | 1597545 | 1598684 | + | GT2 |
Gene ID: Rep_231_c_0_1348
Type: TC
Location: 1594103 - 1594819 (+)
Type: TC
Location: 1594103 - 1594819 (+)
Gene ID: Rep_231_c_0_1349
Type: pfam
Location: 1594847 - 1596169 (+)
Type: pfam
Location: 1594847 - 1596169 (+)
Gene ID: Rep_231_c_0_1350
Type: pfam
Location: 1596309 - 1597466 (+)
Type: pfam
Location: 1596309 - 1597466 (+)
Gene ID: Rep_231_c_0_1351
Type: CAZyme
Location: 1597545 - 1598684 (+)
Type: CAZyme
Location: 1597545 - 1598684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.