Cluster: Rep_231_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1162 | 1414411 | 1415394 | - | GH179 |
| pfam | Rep_231_c_0 | Rep_231_c_0_1163 | 1415424 | 1416029 | - | MMR_HSR1 | FeoB_N |
| TC | Rep_231_c_0 | Rep_231_c_0_1164 | 1416121 | 1417944 | - | 3.A.1.120.6 |
Gene ID: Rep_231_c_0_1162
Type: CAZyme
Location: 1414411 - 1415394 (-)
Type: CAZyme
Location: 1414411 - 1415394 (-)
Gene ID: Rep_231_c_0_1163
Type: pfam
Location: 1415424 - 1416029 (-)
Type: pfam
Location: 1415424 - 1416029 (-)
Gene ID: Rep_231_c_0_1164
Type: TC
Location: 1416121 - 1417944 (-)
Type: TC
Location: 1416121 - 1417944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.