Cluster: Rep_231_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_1144 | 1393979 | 1395289 | + | 2.A.35.1.5 |
| NULL(UNKNOWN) | Rep_231_c_0 | Rep_231_c_0_1145 | 1395390 | 1396085 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_1146 | 1396202 | 1396888 | + | GH25 |
Gene ID: Rep_231_c_0_1144
Type: TC
Location: 1393979 - 1395289 (+)
Type: TC
Location: 1393979 - 1395289 (+)
Gene ID: Rep_231_c_0_1145
Type:
Location: 1395390 - 1396085 (+)
Type:
Location: 1395390 - 1396085 (+)
Gene ID: Rep_231_c_0_1146
Type: CAZyme
Location: 1396202 - 1396888 (+)
Type: CAZyme
Location: 1396202 - 1396888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.