Cluster: Rep_231_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_231_c_0 | Rep_231_c_0_688 | 865100 | 865594 | - | 9.B.154.1.2 |
| NULL(UNKNOWN) | Rep_231_c_0 | Rep_231_c_0_689 | 865636 | 868254 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_231_c_0 | Rep_231_c_0_690 | 868322 | 869506 | - | OmpA |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_691 | 869536 | 870537 | - | GH73 |
Gene ID: Rep_231_c_0_688
Type: TC
Location: 865100 - 865594 (-)
Type: TC
Location: 865100 - 865594 (-)
Gene ID: Rep_231_c_0_689
Type:
Location: 865636 - 868254 (-)
Type:
Location: 865636 - 868254 (-)
Gene ID: Rep_231_c_0_690
Type: pfam
Location: 868322 - 869506 (-)
Type: pfam
Location: 868322 - 869506 (-)
Gene ID: Rep_231_c_0_691
Type: CAZyme
Location: 869536 - 870537 (-)
Type: CAZyme
Location: 869536 - 870537 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_231_c_0_688 | vegan > omnivore | 2.70857 | 0.02769 |
| Rep_231_c_0_688 | vegetarian > omnivore | 3.47439 | 0.00290 |
| Rep_231_c_0_689 | vegan > omnivore | 2.91432 | 0.03124 |
| Rep_231_c_0_689 | vegetarian > omnivore | 3.81419 | 0.00290 |
| Rep_231_c_0_690 | vegetarian > omnivore | 3.89446 | 0.00290 |
| Rep_231_c_0_690 | vegetarian > vegan | 1.00195 | 0.00951 |
| Rep_231_c_0_691 | vegan > omnivore | 2.83742 | 0.02769 |
| Rep_231_c_0_691 | vegetarian > omnivore | 3.81929 | 0.00290 |