Cluster: Rep_231_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_519 | 648572 | 650485 | + | GH133 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_520 | 650504 | 651772 | + | GT4 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_521 | 651857 | 653290 | + | GH57 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_522 | 653402 | 655192 | - | GH43_10 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_523 | 655214 | 657238 | - | GH28 |
| TC | Rep_231_c_0 | Rep_231_c_0_524 | 657481 | 659190 | - | 8.A.46.1.3 |
| TC | Rep_231_c_0 | Rep_231_c_0_525 | 659215 | 662490 | - | 1.B.14.6.1 |
Gene ID: Rep_231_c_0_519
Type: CAZyme
Location: 648572 - 650485 (+)
Type: CAZyme
Location: 648572 - 650485 (+)
Gene ID: Rep_231_c_0_520
Type: CAZyme
Location: 650504 - 651772 (+)
Type: CAZyme
Location: 650504 - 651772 (+)
Gene ID: Rep_231_c_0_521
Type: CAZyme
Location: 651857 - 653290 (+)
Type: CAZyme
Location: 651857 - 653290 (+)
Gene ID: Rep_231_c_0_522
Type: CAZyme
Location: 653402 - 655192 (-)
Type: CAZyme
Location: 653402 - 655192 (-)
Gene ID: Rep_231_c_0_523
Type: CAZyme
Location: 655214 - 657238 (-)
Type: CAZyme
Location: 655214 - 657238 (-)
Gene ID: Rep_231_c_0_524
Type: TC
Location: 657481 - 659190 (-)
Type: TC
Location: 657481 - 659190 (-)
Gene ID: Rep_231_c_0_525
Type: TC
Location: 659215 - 662490 (-)
Type: TC
Location: 659215 - 662490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.