Cluster: Rep_231_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_469 | 592617 | 595550 | + | GH31_4 |
| CAZyme | Rep_231_c_0 | Rep_231_c_0_470 | 595552 | 598053 | + | GH2 |
| pfam | Rep_231_c_0 | Rep_231_c_0_471 | 598443 | 599018 | + | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | Rep_231_c_0 | Rep_231_c_0_472 | 599266 | 600642 | - | 2.A.25.1.3 |
Gene ID: Rep_231_c_0_469
Type: CAZyme
Location: 592617 - 595550 (+)
Type: CAZyme
Location: 592617 - 595550 (+)
Gene ID: Rep_231_c_0_470
Type: CAZyme
Location: 595552 - 598053 (+)
Type: CAZyme
Location: 595552 - 598053 (+)
Gene ID: Rep_231_c_0_471
Type: pfam
Location: 598443 - 599018 (+)
Type: pfam
Location: 598443 - 599018 (+)
Gene ID: Rep_231_c_0_472
Type: TC
Location: 599266 - 600642 (-)
Type: TC
Location: 599266 - 600642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.