Cluster: Rep_231_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_419 | 524665 | 525276 | - | CE4 |
| pfam | Rep_231_c_0 | Rep_231_c_0_420 | 525350 | 528784 | - | TMEM260-like |
| TC | Rep_231_c_0 | Rep_231_c_0_421 | 528951 | 529652 | - | 3.A.1.15.5 |
| pfam | Rep_231_c_0 | Rep_231_c_0_422 | 529666 | 530571 | - | ZnuA |
| TC | Rep_231_c_0 | Rep_231_c_0_423 | 530620 | 531072 | - | 9.B.27.3.3 |
Gene ID: Rep_231_c_0_419
Type: CAZyme
Location: 524665 - 525276 (-)
Type: CAZyme
Location: 524665 - 525276 (-)
Gene ID: Rep_231_c_0_420
Type: pfam
Location: 525350 - 528784 (-)
Type: pfam
Location: 525350 - 528784 (-)
Gene ID: Rep_231_c_0_421
Type: TC
Location: 528951 - 529652 (-)
Type: TC
Location: 528951 - 529652 (-)
Gene ID: Rep_231_c_0_422
Type: pfam
Location: 529666 - 530571 (-)
Type: pfam
Location: 529666 - 530571 (-)
Gene ID: Rep_231_c_0_423
Type: TC
Location: 530620 - 531072 (-)
Type: TC
Location: 530620 - 531072 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.