Cluster: Rep_231_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_231_c_0 | Rep_231_c_0_10 | 11437 | 13617 | + | GH36 |
| pfam | Rep_231_c_0 | Rep_231_c_0_11 | 13714 | 14493 | - | AA_kinase |
| TC | Rep_231_c_0 | Rep_231_c_0_12 | 14562 | 16220 | - | 4.C.1.1.6 |
Gene ID: Rep_231_c_0_10
Type: CAZyme
Location: 11437 - 13617 (+)
Type: CAZyme
Location: 11437 - 13617 (+)
Gene ID: Rep_231_c_0_11
Type: pfam
Location: 13714 - 14493 (-)
Type: pfam
Location: 13714 - 14493 (-)
Gene ID: Rep_231_c_0_12
Type: TC
Location: 14562 - 16220 (-)
Type: TC
Location: 14562 - 16220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_231_c_0_12 | vegetarian > vegan | 1.15808 | 0.00951 |