Cluster: Rep_229_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_229
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_229_c_3 | Rep_229_c_3_101 | 111316 | 112788 | + | CE3 |
| pfam | Rep_229_c_3 | Rep_229_c_3_102 | 113137 | 113751 | + | RuvA_N | RuvA_C | HHH_5 |
| TC | Rep_229_c_3 | Rep_229_c_3_103 | 113810 | 121624 | + | 9.A.25.1.1 |
| TC | Rep_229_c_3 | Rep_229_c_3_104 | 121834 | 123423 | - | 3.D.10.1.4 |
| pfam | Rep_229_c_3 | Rep_229_c_3_105 | 123686 | 124105 | + | bPH_4 |
| peptidase | Rep_229_c_3 | Rep_229_c_3_106 | 124109 | 125458 | + | S13.UPW |
| TC | Rep_229_c_3 | Rep_229_c_3_107 | 125500 | 126723 | + | 1.A.23.4.5 |
Gene ID: Rep_229_c_3_101
Type: CAZyme
Location: 111316 - 112788 (+)
Type: CAZyme
Location: 111316 - 112788 (+)
Gene ID: Rep_229_c_3_102
Type: pfam
Location: 113137 - 113751 (+)
Type: pfam
Location: 113137 - 113751 (+)
Gene ID: Rep_229_c_3_103
Type: TC
Location: 113810 - 121624 (+)
Type: TC
Location: 113810 - 121624 (+)
Gene ID: Rep_229_c_3_104
Type: TC
Location: 121834 - 123423 (-)
Type: TC
Location: 121834 - 123423 (-)
Gene ID: Rep_229_c_3_105
Type: pfam
Location: 123686 - 124105 (+)
Type: pfam
Location: 123686 - 124105 (+)
Gene ID: Rep_229_c_3_106
Type: peptidase
Location: 124109 - 125458 (+)
Type: peptidase
Location: 124109 - 125458 (+)
Gene ID: Rep_229_c_3_107
Type: TC
Location: 125500 - 126723 (+)
Type: TC
Location: 125500 - 126723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.