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Cluster: Rep_229_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_229_c_2 Rep_229_c_2_53 81564 82820 - GH88
CAZyme Rep_229_c_2 Rep_229_c_2_54 82868 84871 - PL12_2
sulfatase Rep_229_c_2 Rep_229_c_2_55 85107 86474 + S1_9
CAZyme Rep_229_c_2 Rep_229_c_2_56 86499 89114 + PL15_2
TC Rep_229_c_2 Rep_229_c_2_57 89144 92329 + 1.B.14.6.1
TC Rep_229_c_2 Rep_229_c_2_58 92344 94047 + 8.A.46.1.3
NULL(UNKNOWN) Rep_229_c_2 Rep_229_c_2_59 94116 94637 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_229_c_2 Rep_229_c_2_60 94697 95359 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_229_c_2 Rep_229_c_2_61 95372 97963 + PL15
Gene ID: Rep_229_c_2_53
Type: CAZyme
Location: 81564 - 82820 (-)
Gene ID: Rep_229_c_2_54
Type: CAZyme
Location: 82868 - 84871 (-)
Gene ID: Rep_229_c_2_55
Type: sulfatase
Location: 85107 - 86474 (+)
Gene ID: Rep_229_c_2_56
Type: CAZyme
Location: 86499 - 89114 (+)
Gene ID: Rep_229_c_2_57
Type: TC
Location: 89144 - 92329 (+)
Gene ID: Rep_229_c_2_58
Type: TC
Location: 92344 - 94047 (+)
Gene ID: Rep_229_c_2_59
Type:
Location: 94116 - 94637 (+)
Gene ID: Rep_229_c_2_60
Type:
Location: 94697 - 95359 (+)
Gene ID: Rep_229_c_2_61
Type: CAZyme
Location: 95372 - 97963 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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