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Cluster: Rep_229_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_229_c_41 Rep_229_c_41_2 751 1119 + 1.E.14.1.15
TC Rep_229_c_41 Rep_229_c_41_3 1149 1838 + 2.A.122.1.1
STP Rep_229_c_41 Rep_229_c_41_4 2107 3279 + Aminotran_1_2
TC Rep_229_c_41 Rep_229_c_41_5 3295 4740 + 2.A.66.2.23
pfam Rep_229_c_41 Rep_229_c_41_6 4743 5357 + Hexapep
CAZyme Rep_229_c_41 Rep_229_c_41_7 5357 6262 + GT2
CAZyme Rep_229_c_41 Rep_229_c_41_8 6268 7311 + GT2
CAZyme Rep_229_c_41 Rep_229_c_41_9 7308 8255 + GT2
CAZyme Rep_229_c_41 Rep_229_c_41_10 8252 9424 + GT4
TC Rep_229_c_41 Rep_229_c_41_11 9428 10528 + 9.B.183.1.7
CAZyme Rep_229_c_41 Rep_229_c_41_12 10538 11623 + GT4
CAZyme Rep_229_c_41 Rep_229_c_41_13 11657 12709 + GT4
CAZyme Rep_229_c_41 Rep_229_c_41_14 12729 13544 + GT2
pfam Rep_229_c_41 Rep_229_c_41_15 13553 14662 + NTP_transf_5
TC Rep_229_c_41 Rep_229_c_41_16 14733 15953 + 9.B.146.1.4
Gene ID: Rep_229_c_41_2
Type: TC
Location: 751 - 1119 (+)
Gene ID: Rep_229_c_41_3
Type: TC
Location: 1149 - 1838 (+)
Gene ID: Rep_229_c_41_4
Type: STP
Location: 2107 - 3279 (+)
Gene ID: Rep_229_c_41_5
Type: TC
Location: 3295 - 4740 (+)
Gene ID: Rep_229_c_41_6
Type: pfam
Location: 4743 - 5357 (+)
Gene ID: Rep_229_c_41_7
Type: CAZyme
Location: 5357 - 6262 (+)
Gene ID: Rep_229_c_41_8
Type: CAZyme
Location: 6268 - 7311 (+)
Gene ID: Rep_229_c_41_9
Type: CAZyme
Location: 7308 - 8255 (+)
Gene ID: Rep_229_c_41_10
Type: CAZyme
Location: 8252 - 9424 (+)
Gene ID: Rep_229_c_41_11
Type: TC
Location: 9428 - 10528 (+)
Gene ID: Rep_229_c_41_12
Type: CAZyme
Location: 10538 - 11623 (+)
Gene ID: Rep_229_c_41_13
Type: CAZyme
Location: 11657 - 12709 (+)
Gene ID: Rep_229_c_41_14
Type: CAZyme
Location: 12729 - 13544 (+)
Gene ID: Rep_229_c_41_15
Type: pfam
Location: 13553 - 14662 (+)
Gene ID: Rep_229_c_41_16
Type: TC
Location: 14733 - 15953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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