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Cluster: Rep_229_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_229_c_31 Rep_229_c_31_10 16519 19110 + GH31_15
pfam Rep_229_c_31 Rep_229_c_31_11 19125 20516 + SusF_SusE
TC Rep_229_c_31 Rep_229_c_31_12 20576 23560 + 1.B.14.6.1
pfam Rep_229_c_31 Rep_229_c_31_13 23585 25312 + SusD_RagB | SusD-like_3
pfam Rep_229_c_31 Rep_229_c_31_14 25337 26512 + SusF_SusE | SusF_SusE | SusF_SusE
CAZyme Rep_229_c_31 Rep_229_c_31_15 26535 27959 + GH27
CAZyme Rep_229_c_31 Rep_229_c_31_16 27995 30154 + GH97
CAZyme Rep_229_c_31 Rep_229_c_31_17 30247 32547 + GH66
pfam Rep_229_c_31 Rep_229_c_31_18 32603 34168 + SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE
TC Rep_229_c_31 Rep_229_c_31_19 34515 36215 + 2.A.58.2.2
Gene ID: Rep_229_c_31_10
Type: CAZyme
Location: 16519 - 19110 (+)
Gene ID: Rep_229_c_31_11
Type: pfam
Location: 19125 - 20516 (+)
Gene ID: Rep_229_c_31_12
Type: TC
Location: 20576 - 23560 (+)
Gene ID: Rep_229_c_31_13
Type: pfam
Location: 23585 - 25312 (+)
Gene ID: Rep_229_c_31_14
Type: pfam
Location: 25337 - 26512 (+)
Gene ID: Rep_229_c_31_15
Type: CAZyme
Location: 26535 - 27959 (+)
Gene ID: Rep_229_c_31_16
Type: CAZyme
Location: 27995 - 30154 (+)
Gene ID: Rep_229_c_31_17
Type: CAZyme
Location: 30247 - 32547 (+)
Gene ID: Rep_229_c_31_18
Type: pfam
Location: 32603 - 34168 (+)
Gene ID: Rep_229_c_31_19
Type: TC
Location: 34515 - 36215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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