Cluster: Rep_229_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_229
- CGC Family ID: CGCFAM_01638
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_229_c_8 | Rep_229_c_8_58 | 70149 | 72605 | - | GH2 |
| NULL(UNKNOWN) | Rep_229_c_8 | Rep_229_c_8_59 | 72624 | 72803 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | Rep_229_c_8 | Rep_229_c_8_60 | 72807 | 73232 | - | S1_8 |
| TC | Rep_229_c_8 | Rep_229_c_8_61 | 73289 | 74167 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_229_c_8 | Rep_229_c_8_62 | 74398 | 75048 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_229_c_8 | Rep_229_c_8_63 | 75283 | 78132 | - | PL1 |
| NULL(UNKNOWN) | Rep_229_c_8 | Rep_229_c_8_64 | 78150 | 78509 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_229_c_8 | Rep_229_c_8_65 | 79109 | 80137 | + | HHH_3 | HHH_3 | HHH_3 |
| TC | Rep_229_c_8 | Rep_229_c_8_66 | 80184 | 81539 | - | 2.A.22.5.3 |
| TC | Rep_229_c_8 | Rep_229_c_8_67 | 81601 | 82974 | - | 2.A.22.5.3 |
Gene ID: Rep_229_c_8_58
Type: CAZyme
Location: 70149 - 72605 (-)
Type: CAZyme
Location: 70149 - 72605 (-)
Gene ID: Rep_229_c_8_59
Type:
Location: 72624 - 72803 (-)
Type:
Location: 72624 - 72803 (-)
Gene ID: Rep_229_c_8_60
Type: sulfatase
Location: 72807 - 73232 (-)
Type: sulfatase
Location: 72807 - 73232 (-)
Gene ID: Rep_229_c_8_61
Type: TC
Location: 73289 - 74167 (-)
Type: TC
Location: 73289 - 74167 (-)
Gene ID: Rep_229_c_8_62
Type:
Location: 74398 - 75048 (-)
Type:
Location: 74398 - 75048 (-)
Gene ID: Rep_229_c_8_63
Type: CAZyme
Location: 75283 - 78132 (-)
Type: CAZyme
Location: 75283 - 78132 (-)
Gene ID: Rep_229_c_8_64
Type:
Location: 78150 - 78509 (-)
Type:
Location: 78150 - 78509 (-)
Gene ID: Rep_229_c_8_65
Type: pfam
Location: 79109 - 80137 (+)
Type: pfam
Location: 79109 - 80137 (+)
Gene ID: Rep_229_c_8_66
Type: TC
Location: 80184 - 81539 (-)
Type: TC
Location: 80184 - 81539 (-)
Gene ID: Rep_229_c_8_67
Type: TC
Location: 81601 - 82974 (-)
Type: TC
Location: 81601 - 82974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_229_c_8_62 | vegetarian > omnivore | 1.21671 | 0.02010 |
| Rep_229_c_8_62 | vegetarian > vegan | 3.33149 | 0.00667 |
| Rep_229_c_8_63 | vegetarian > vegan | 1.86657 | 0.00667 |
| Rep_229_c_8_64 | vegetarian > omnivore | 1.05940 | 0.02010 |
| Rep_229_c_8_64 | vegetarian > vegan | 2.04676 | 0.00667 |