Cluster: Rep_2297_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_0 | Rep_2297_c_0_297 | 327451 | 328563 | + | GH18 |
| pfam | Rep_2297_c_0 | Rep_2297_c_0_298 | 328607 | 328969 | - | P-II |
| TC | Rep_2297_c_0 | Rep_2297_c_0_299 | 328986 | 330227 | - | 1.A.11.1.4 |
Gene ID: Rep_2297_c_0_297
Type: CAZyme
Location: 327451 - 328563 (+)
Type: CAZyme
Location: 327451 - 328563 (+)
Gene ID: Rep_2297_c_0_298
Type: pfam
Location: 328607 - 328969 (-)
Type: pfam
Location: 328607 - 328969 (-)
Gene ID: Rep_2297_c_0_299
Type: TC
Location: 328986 - 330227 (-)
Type: TC
Location: 328986 - 330227 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.