Cluster: Rep_2297_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- CGC Family ID: CGCFAM_10905
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_0 | Rep_2297_c_0_218 | 225617 | 226168 | + | 3.A.1.26.9 |
| pfam | Rep_2297_c_0 | Rep_2297_c_0_219 | 226180 | 226782 | - | G3P_acyltransf |
| CAZyme | Rep_2297_c_0 | Rep_2297_c_0_220 | 226779 | 227933 | - | GT28 |
| pfam | Rep_2297_c_0 | Rep_2297_c_0_221 | 227940 | 228386 | - | YqeY |
| TC | Rep_2297_c_0 | Rep_2297_c_0_222 | 228690 | 230321 | + | 2.A.58.2.2 |
Gene ID: Rep_2297_c_0_218
Type: TC
Location: 225617 - 226168 (+)
Type: TC
Location: 225617 - 226168 (+)
Gene ID: Rep_2297_c_0_219
Type: pfam
Location: 226180 - 226782 (-)
Type: pfam
Location: 226180 - 226782 (-)
Gene ID: Rep_2297_c_0_220
Type: CAZyme
Location: 226779 - 227933 (-)
Type: CAZyme
Location: 226779 - 227933 (-)
Gene ID: Rep_2297_c_0_221
Type: pfam
Location: 227940 - 228386 (-)
Type: pfam
Location: 227940 - 228386 (-)
Gene ID: Rep_2297_c_0_222
Type: TC
Location: 228690 - 230321 (+)
Type: TC
Location: 228690 - 230321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.