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Cluster: Rep_2297_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2297_c_15 Rep_2297_c_15_5 4609 5967 + GH13_20
pfam Rep_2297_c_15 Rep_2297_c_15_6 6012 7208 + PucR | HTH_30 | GGDEF_2
TC Rep_2297_c_15 Rep_2297_c_15_7 7429 8328 + 3.A.1.3.20
TC Rep_2297_c_15 Rep_2297_c_15_8 8357 9115 + 3.A.1.3.20
TC Rep_2297_c_15 Rep_2297_c_15_9 9126 9866 + 3.A.1.3.20
TC Rep_2297_c_15 Rep_2297_c_15_10 9884 10549 + 2.A.115.2.14
Gene ID: Rep_2297_c_15_5
Type: CAZyme
Location: 4609 - 5967 (+)
Gene ID: Rep_2297_c_15_6
Type: pfam
Location: 6012 - 7208 (+)
Gene ID: Rep_2297_c_15_7
Type: TC
Location: 7429 - 8328 (+)
Gene ID: Rep_2297_c_15_8
Type: TC
Location: 8357 - 9115 (+)
Gene ID: Rep_2297_c_15_9
Type: TC
Location: 9126 - 9866 (+)
Gene ID: Rep_2297_c_15_10
Type: TC
Location: 9884 - 10549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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