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Cluster: Rep_2297_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_12 Rep_2297_c_12_43 45638 46939 + 3.A.1.1.28
TC Rep_2297_c_12 Rep_2297_c_12_44 46936 47811 + 3.A.1.1.45
TC Rep_2297_c_12 Rep_2297_c_12_45 47808 48650 + 3.A.1.1.28
CAZyme Rep_2297_c_12 Rep_2297_c_12_46 48672 51479 + GH36
CAZyme Rep_2297_c_12 Rep_2297_c_12_47 51463 52947 + GH13_18
Gene ID: Rep_2297_c_12_43
Type: TC
Location: 45638 - 46939 (+)
Gene ID: Rep_2297_c_12_44
Type: TC
Location: 46936 - 47811 (+)
Gene ID: Rep_2297_c_12_45
Type: TC
Location: 47808 - 48650 (+)
Gene ID: Rep_2297_c_12_46
Type: CAZyme
Location: 48672 - 51479 (+)
Gene ID: Rep_2297_c_12_47
Type: CAZyme
Location: 51463 - 52947 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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