Cluster: Rep_2297_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_7 | Rep_2297_c_7_40 | 37048 | 39303 | - | GH3 |
| STP | Rep_2297_c_7 | Rep_2297_c_7_41 | 39316 | 39546 | - | PTS-HPr |
| CAZyme | Rep_2297_c_7 | Rep_2297_c_7_42 | 39563 | 41134 | - | GH78 |
| TC | Rep_2297_c_7 | Rep_2297_c_7_43 | 41122 | 42486 | - | 2.A.2.3.3 |
Gene ID: Rep_2297_c_7_40
Type: CAZyme
Location: 37048 - 39303 (-)
Type: CAZyme
Location: 37048 - 39303 (-)
Gene ID: Rep_2297_c_7_41
Type: STP
Location: 39316 - 39546 (-)
Type: STP
Location: 39316 - 39546 (-)
Gene ID: Rep_2297_c_7_42
Type: CAZyme
Location: 39563 - 41134 (-)
Type: CAZyme
Location: 39563 - 41134 (-)
Gene ID: Rep_2297_c_7_43
Type: TC
Location: 41122 - 42486 (-)
Type: TC
Location: 41122 - 42486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.