Cluster: Rep_2297_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_6 | Rep_2297_c_6_57 | 74144 | 74800 | - | 1.C.113.1.3 |
| TC | Rep_2297_c_6 | Rep_2297_c_6_58 | 75023 | 76606 | + | 3.A.18.1.1 |
| pfam | Rep_2297_c_6 | Rep_2297_c_6_59 | 76703 | 77317 | + | ECF-ribofla_trS | ECF_trnsprt |
| CAZyme | Rep_2297_c_6 | Rep_2297_c_6_60 | 77376 | 79622 | - | GH2 |
| TC | Rep_2297_c_6 | Rep_2297_c_6_61 | 79642 | 81048 | - | 2.A.2.3.2 |
Gene ID: Rep_2297_c_6_57
Type: TC
Location: 74144 - 74800 (-)
Type: TC
Location: 74144 - 74800 (-)
Gene ID: Rep_2297_c_6_58
Type: TC
Location: 75023 - 76606 (+)
Type: TC
Location: 75023 - 76606 (+)
Gene ID: Rep_2297_c_6_59
Type: pfam
Location: 76703 - 77317 (+)
Type: pfam
Location: 76703 - 77317 (+)
Gene ID: Rep_2297_c_6_60
Type: CAZyme
Location: 77376 - 79622 (-)
Type: CAZyme
Location: 77376 - 79622 (-)
Gene ID: Rep_2297_c_6_61
Type: TC
Location: 79642 - 81048 (-)
Type: TC
Location: 79642 - 81048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.