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Cluster: Rep_2297_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_4 Rep_2297_c_4_96 98196 99422 - 5.A.1.2.7
pfam Rep_2297_c_4 Rep_2297_c_4_97 99423 100001 - Ubie_methyltran | rRNA_methylase | Methyltransf_31
STP Rep_2297_c_4 Rep_2297_c_4_98 100091 100639 - TPR_2
TC Rep_2297_c_4 Rep_2297_c_4_99 100652 102511 - 3.A.3.6.10
TF Rep_2297_c_4 Rep_2297_c_4_100 102514 102873 - HTH_5
TC Rep_2297_c_4 Rep_2297_c_4_101 103056 105392 - 3.A.3.6.10
STP Rep_2297_c_4 Rep_2297_c_4_102 105823 107097 - HATPase_c | HisKA
TF Rep_2297_c_4 Rep_2297_c_4_103 107069 107776 - Trans_reg_C
TC Rep_2297_c_4 Rep_2297_c_4_104 107952 109346 - 2.A.2.3.1
CAZyme Rep_2297_c_4 Rep_2297_c_4_105 109390 111657 - GH2
Gene ID: Rep_2297_c_4_96
Type: TC
Location: 98196 - 99422 (-)
Gene ID: Rep_2297_c_4_97
Type: pfam
Location: 99423 - 100001 (-)
Gene ID: Rep_2297_c_4_98
Type: STP
Location: 100091 - 100639 (-)
Gene ID: Rep_2297_c_4_99
Type: TC
Location: 100652 - 102511 (-)
Gene ID: Rep_2297_c_4_100
Type: TF
Location: 102514 - 102873 (-)
Gene ID: Rep_2297_c_4_101
Type: TC
Location: 103056 - 105392 (-)
Gene ID: Rep_2297_c_4_102
Type: STP
Location: 105823 - 107097 (-)
Gene ID: Rep_2297_c_4_103
Type: TF
Location: 107069 - 107776 (-)
Gene ID: Rep_2297_c_4_104
Type: TC
Location: 107952 - 109346 (-)
Gene ID: Rep_2297_c_4_105
Type: CAZyme
Location: 109390 - 111657 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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