Cluster: Rep_2297_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_3 | Rep_2297_c_3_241 | 246162 | 247880 | - | 8.A.59.2.1 |
| pfam | Rep_2297_c_3 | Rep_2297_c_3_242 | 247959 | 248225 | - | SpoIIID |
| NULL(UNKNOWN) | Rep_2297_c_3 | Rep_2297_c_3_243 | 248742 | 248882 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2297_c_3 | Rep_2297_c_3_244 | 249154 | 250833 | + | GH5_4 |
Gene ID: Rep_2297_c_3_241
Type: TC
Location: 246162 - 247880 (-)
Type: TC
Location: 246162 - 247880 (-)
Gene ID: Rep_2297_c_3_242
Type: pfam
Location: 247959 - 248225 (-)
Type: pfam
Location: 247959 - 248225 (-)
Gene ID: Rep_2297_c_3_243
Type:
Location: 248742 - 248882 (-)
Type:
Location: 248742 - 248882 (-)
Gene ID: Rep_2297_c_3_244
Type: CAZyme
Location: 249154 - 250833 (+)
Type: CAZyme
Location: 249154 - 250833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.