Cluster: Rep_2297_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2297_c_3 | Rep_2297_c_3_32 | 30584 | 31447 | - | CE6 |
| pfam | Rep_2297_c_3 | Rep_2297_c_3_33 | 31527 | 32006 | - | Pep_deformylase |
| pfam | Rep_2297_c_3 | Rep_2297_c_3_34 | 32022 | 32822 | - | ABC2_membrane_4 |
| TC | Rep_2297_c_3 | Rep_2297_c_3_35 | 32816 | 33742 | - | 3.A.1.131.1 |
Gene ID: Rep_2297_c_3_32
Type: CAZyme
Location: 30584 - 31447 (-)
Type: CAZyme
Location: 30584 - 31447 (-)
Gene ID: Rep_2297_c_3_33
Type: pfam
Location: 31527 - 32006 (-)
Type: pfam
Location: 31527 - 32006 (-)
Gene ID: Rep_2297_c_3_34
Type: pfam
Location: 32022 - 32822 (-)
Type: pfam
Location: 32022 - 32822 (-)
Gene ID: Rep_2297_c_3_35
Type: TC
Location: 32816 - 33742 (-)
Type: TC
Location: 32816 - 33742 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.