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Cluster: Rep_2297_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_2 Rep_2297_c_2_310 319693 320448 + 8.A.49.1.1
pfam Rep_2297_c_2 Rep_2297_c_2_311 320526 321671 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC Rep_2297_c_2 Rep_2297_c_2_312 321879 323363 + 2.A.114.1.2
pfam Rep_2297_c_2 Rep_2297_c_2_313 323456 324025 + Flavodoxin_2 | FMN_red
CAZyme Rep_2297_c_2 Rep_2297_c_2_314 324177 325124 + GT2
pfam Rep_2297_c_2 Rep_2297_c_2_315 325121 327757 + YfhO | YfhO
pfam Rep_2297_c_2 Rep_2297_c_2_316 327692 328840 - Gly_kinase
TC Rep_2297_c_2 Rep_2297_c_2_317 328874 330265 - 2.A.8.1.6
Gene ID: Rep_2297_c_2_310
Type: TC
Location: 319693 - 320448 (+)
Gene ID: Rep_2297_c_2_311
Type: pfam
Location: 320526 - 321671 (+)
Gene ID: Rep_2297_c_2_312
Type: TC
Location: 321879 - 323363 (+)
Gene ID: Rep_2297_c_2_313
Type: pfam
Location: 323456 - 324025 (+)
Gene ID: Rep_2297_c_2_314
Type: CAZyme
Location: 324177 - 325124 (+)
Gene ID: Rep_2297_c_2_315
Type: pfam
Location: 325121 - 327757 (+)
Gene ID: Rep_2297_c_2_316
Type: pfam
Location: 327692 - 328840 (-)
Gene ID: Rep_2297_c_2_317
Type: TC
Location: 328874 - 330265 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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