Cluster: Rep_2297_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2297
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2297_c_1 | Rep_2297_c_1_64 | 67812 | 69185 | + | 2.A.2.3.2 |
| CAZyme | Rep_2297_c_1 | Rep_2297_c_1_65 | 69188 | 71665 | + | GH2 |
| pfam | Rep_2297_c_1 | Rep_2297_c_1_66 | 71834 | 73111 | + | PG_binding_1 |
| TC | Rep_2297_c_1 | Rep_2297_c_1_67 | 73204 | 73587 | + | 1.E.14.1.1 |
| TC | Rep_2297_c_1 | Rep_2297_c_1_68 | 73584 | 74276 | + | 2.A.122.1.4 |
Gene ID: Rep_2297_c_1_64
Type: TC
Location: 67812 - 69185 (+)
Type: TC
Location: 67812 - 69185 (+)
Gene ID: Rep_2297_c_1_65
Type: CAZyme
Location: 69188 - 71665 (+)
Type: CAZyme
Location: 69188 - 71665 (+)
Gene ID: Rep_2297_c_1_66
Type: pfam
Location: 71834 - 73111 (+)
Type: pfam
Location: 71834 - 73111 (+)
Gene ID: Rep_2297_c_1_67
Type: TC
Location: 73204 - 73587 (+)
Type: TC
Location: 73204 - 73587 (+)
Gene ID: Rep_2297_c_1_68
Type: TC
Location: 73584 - 74276 (+)
Type: TC
Location: 73584 - 74276 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B gnavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.