dbCAN Logo

Cluster: Rep_2297_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2297_c_1 Rep_2297_c_1_29 28368 30449 + 3.A.3.32.3
pfam Rep_2297_c_1 Rep_2297_c_1_30 30568 30855 + DUF2325
pfam Rep_2297_c_1 Rep_2297_c_1_31 30982 32181 + MFS_1
TC Rep_2297_c_1 Rep_2297_c_1_32 32178 33536 + 2.A.66.1.32
NULL(UNKNOWN) Rep_2297_c_1 Rep_2297_c_1_33 33716 34312 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2297_c_1 Rep_2297_c_1_34 34348 37215 + GH3
pfam Rep_2297_c_1 Rep_2297_c_1_35 37327 37749 - Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7
pfam Rep_2297_c_1 Rep_2297_c_1_36 38146 39285 + PDDEXK_2
CAZyme Rep_2297_c_1 Rep_2297_c_1_37 39406 41841 + GH3
Gene ID: Rep_2297_c_1_29
Type: TC
Location: 28368 - 30449 (+)
Gene ID: Rep_2297_c_1_30
Type: pfam
Location: 30568 - 30855 (+)
Gene ID: Rep_2297_c_1_31
Type: pfam
Location: 30982 - 32181 (+)
Gene ID: Rep_2297_c_1_32
Type: TC
Location: 32178 - 33536 (+)
Gene ID: Rep_2297_c_1_33
Type:
Location: 33716 - 34312 (+)
Gene ID: Rep_2297_c_1_34
Type: CAZyme
Location: 34348 - 37215 (+)
Gene ID: Rep_2297_c_1_35
Type: pfam
Location: 37327 - 37749 (-)
Gene ID: Rep_2297_c_1_36
Type: pfam
Location: 38146 - 39285 (+)
Gene ID: Rep_2297_c_1_37
Type: CAZyme
Location: 39406 - 41841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List