Cluster: Rep_224_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_224_c_16 | Rep_224_c_16_5 | 3805 | 4878 | - | GT9 |
| pfam | Rep_224_c_16 | Rep_224_c_16_6 | 4906 | 5514 | - | DUF4254 |
| NULL(UNKNOWN) | Rep_224_c_16 | Rep_224_c_16_7 | 5538 | 5630 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_224_c_16 | Rep_224_c_16_8 | 5742 | 5978 | + | 3.D.1.6.3 |
Gene ID: Rep_224_c_16_5
Type: CAZyme
Location: 3805 - 4878 (-)
Type: CAZyme
Location: 3805 - 4878 (-)
Gene ID: Rep_224_c_16_6
Type: pfam
Location: 4906 - 5514 (-)
Type: pfam
Location: 4906 - 5514 (-)
Gene ID: Rep_224_c_16_7
Type:
Location: 5538 - 5630 (-)
Type:
Location: 5538 - 5630 (-)
Gene ID: Rep_224_c_16_8
Type: TC
Location: 5742 - 5978 (+)
Type: TC
Location: 5742 - 5978 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_224_c_16_6 | vegetarian > vegan | 1.08458 | 0.00861 |