Cluster: Rep_224_CGC36
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_224_c_116 | Rep_224_c_116_1 | 895 | 2979 | - | PL8_3 |
| pfam | Rep_224_c_116 | Rep_224_c_116_2 | 3112 | 3987 | - | TPR_6 | TPR_8 | TPR_8 | TPR_16 |
| pfam | Rep_224_c_116 | Rep_224_c_116_3 | 4177 | 4980 | - | DUF2807 | DUF2807 |
| TC | Rep_224_c_116 | Rep_224_c_116_4 | 5140 | 6591 | - | 3.D.1.2.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_5 | 6607 | 8109 | - | 3.D.1.5.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_6 | 8139 | 10103 | - | 3.D.9.1.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_7 | 10112 | 10420 | - | 3.D.1.2.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_8 | 10417 | 10923 | - | 3.D.9.1.1 |
| STP | Rep_224_c_116 | Rep_224_c_116_9 | 10963 | 11490 | - | Fer4 | Fer4 |
| TC | Rep_224_c_116 | Rep_224_c_116_10 | 11538 | 12623 | - | 3.D.1.5.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_11 | 12655 | 14226 | - | 3.D.1.5.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_12 | 14248 | 14973 | - | 3.D.1.6.1 |
| TC | Rep_224_c_116 | Rep_224_c_116_13 | 14964 | 15314 | - | 3.D.1.8.1 |
Gene ID: Rep_224_c_116_1
Type: CAZyme
Location: 895 - 2979 (-)
Type: CAZyme
Location: 895 - 2979 (-)
Gene ID: Rep_224_c_116_2
Type: pfam
Location: 3112 - 3987 (-)
Type: pfam
Location: 3112 - 3987 (-)
Gene ID: Rep_224_c_116_3
Type: pfam
Location: 4177 - 4980 (-)
Type: pfam
Location: 4177 - 4980 (-)
Gene ID: Rep_224_c_116_4
Type: TC
Location: 5140 - 6591 (-)
Type: TC
Location: 5140 - 6591 (-)
Gene ID: Rep_224_c_116_5
Type: TC
Location: 6607 - 8109 (-)
Type: TC
Location: 6607 - 8109 (-)
Gene ID: Rep_224_c_116_6
Type: TC
Location: 8139 - 10103 (-)
Type: TC
Location: 8139 - 10103 (-)
Gene ID: Rep_224_c_116_7
Type: TC
Location: 10112 - 10420 (-)
Type: TC
Location: 10112 - 10420 (-)
Gene ID: Rep_224_c_116_8
Type: TC
Location: 10417 - 10923 (-)
Type: TC
Location: 10417 - 10923 (-)
Gene ID: Rep_224_c_116_9
Type: STP
Location: 10963 - 11490 (-)
Type: STP
Location: 10963 - 11490 (-)
Gene ID: Rep_224_c_116_10
Type: TC
Location: 11538 - 12623 (-)
Type: TC
Location: 11538 - 12623 (-)
Gene ID: Rep_224_c_116_11
Type: TC
Location: 12655 - 14226 (-)
Type: TC
Location: 12655 - 14226 (-)
Gene ID: Rep_224_c_116_12
Type: TC
Location: 14248 - 14973 (-)
Type: TC
Location: 14248 - 14973 (-)
Gene ID: Rep_224_c_116_13
Type: TC
Location: 14964 - 15314 (-)
Type: TC
Location: 14964 - 15314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_224_c_116_9 | vegetarian > vegan | 1.06278 | 0.00861 |