Cluster: Rep_224_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_224_c_56 | Rep_224_c_56_9 | 7238 | 8683 | + | CBM20 |
| TF | Rep_224_c_56 | Rep_224_c_56_10 | 8803 | 9510 | - | LytTR |
| TC | Rep_224_c_56 | Rep_224_c_56_11 | 9644 | 10882 | - | 3.A.1.122.1 |
| TC | Rep_224_c_56 | Rep_224_c_56_12 | 10922 | 11692 | - | 3.A.1.122.2 |
| TC | Rep_224_c_56 | Rep_224_c_56_13 | 11703 | 12890 | - | 3.A.1.122.1 |
Gene ID: Rep_224_c_56_9
Type: CAZyme
Location: 7238 - 8683 (+)
Type: CAZyme
Location: 7238 - 8683 (+)
Gene ID: Rep_224_c_56_10
Type: TF
Location: 8803 - 9510 (-)
Type: TF
Location: 8803 - 9510 (-)
Gene ID: Rep_224_c_56_11
Type: TC
Location: 9644 - 10882 (-)
Type: TC
Location: 9644 - 10882 (-)
Gene ID: Rep_224_c_56_12
Type: TC
Location: 10922 - 11692 (-)
Type: TC
Location: 10922 - 11692 (-)
Gene ID: Rep_224_c_56_13
Type: TC
Location: 11703 - 12890 (-)
Type: TC
Location: 11703 - 12890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.