Cluster: Rep_2233_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2233
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2233_c_7 | Rep_2233_c_7_51 | 61892 | 62680 | - | GT2 |
| CAZyme | Rep_2233_c_7 | Rep_2233_c_7_52 | 62684 | 63655 | - | GT2 |
| NULL(UNKNOWN) | Rep_2233_c_7 | Rep_2233_c_7_53 | 63675 | 64646 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2233_c_7 | Rep_2233_c_7_54 | 64822 | 66507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2233_c_7 | Rep_2233_c_7_55 | 66565 | 67917 | + | 9.B.18.1.3 |
| CAZyme | Rep_2233_c_7 | Rep_2233_c_7_56 | 67910 | 69172 | + | GT4 |
| CAZyme | Rep_2233_c_7 | Rep_2233_c_7_57 | 69156 | 70835 | + | PL12 |
Gene ID: Rep_2233_c_7_51
Type: CAZyme
Location: 61892 - 62680 (-)
Type: CAZyme
Location: 61892 - 62680 (-)
Gene ID: Rep_2233_c_7_52
Type: CAZyme
Location: 62684 - 63655 (-)
Type: CAZyme
Location: 62684 - 63655 (-)
Gene ID: Rep_2233_c_7_53
Type:
Location: 63675 - 64646 (-)
Type:
Location: 63675 - 64646 (-)
Gene ID: Rep_2233_c_7_54
Type:
Location: 64822 - 66507 (+)
Type:
Location: 64822 - 66507 (+)
Gene ID: Rep_2233_c_7_55
Type: TC
Location: 66565 - 67917 (+)
Type: TC
Location: 66565 - 67917 (+)
Gene ID: Rep_2233_c_7_56
Type: CAZyme
Location: 67910 - 69172 (+)
Type: CAZyme
Location: 67910 - 69172 (+)
Gene ID: Rep_2233_c_7_57
Type: CAZyme
Location: 69156 - 70835 (+)
Type: CAZyme
Location: 69156 - 70835 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.