PROTEIN: Rep_2233_c_7_54
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Protein File & Metadata
Source:
Rep_2233_c_7_54.pdb
Genome ID:
Protein ID:
Rep_2233_c_7_54
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Protein Sequence
MKKNLTKVLL YPLFLIVILR GITPFVYAII DDRSMMEILS GQYLGYPDPH AIFLGYWYSC 60 ILTGLYRISV HVDWYALLFL LVQWGCMSLI LYRVQGQRED RNAQDRRVAL TMVSFFLVGL 120 QTLTQLTFTT TAAVVAATVL YWYVTSEKIE GKHFAVLFLL CFLTQQIRLE IFLMILPVCS 180 LFWFIRLHRR GILGMGRWEI CLPMVAVTVL GIAFLGNVVG YGSPEWKAYN QYNQYRSDIY 240 DYPDYTFPPY EDAEDLYAAA GIDTKSRART LINYDYTADD QIVPEFFEQY IKTYQQMCPS 300 EQSRIERLIE SAKSYVKGVL SDRFQPAQSV GMVLLGLLLF LTIWKRHWIQ VVETALLMGI 360 QIVLWLYLLY KGRIPARAIY SMNLLLWTIV LLLWREYFHS IEEQIPEPLK KKGMTLLILV 420 LLGVGVLYGK DIRTQNLEIS NRCKNVEQLK TFCGEHTKNF YFNDVTTLAF TTWDVKLWKN 480 ETYTMNYMSL GDWMSFSPLW KEKLDQQGIT SVREALYQRD NVYLICTFDK GLEYLTSLYE 540 NTTCTEVDRA GLFHIYKLQS L 561
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2PZI1-F1-model_v4 | 1 | 561 | 20 | 675 | 0.5585 |
0.6251 |
| AF-P34413-F1-model_v4 | 1 | 559 | 25 | 683 | 0.553 |
0.6241 |
| AF-E7FB04-F1-model_v4 | 1 | 561 | 49 | 730 | 0.5422 |
0.6256 |
| AF-D4AD75-F1-model_v4 | 1 | 561 | 67 | 746 | 0.5386 |
0.6263 |
| AF-A6X919-F1-model_v4 | 1 | 561 | 67 | 746 | 0.538 |
0.6254 |
| AF-P0CW70-F1-model_v4 | 1 | 560 | 121 | 773 | 0.5293 |
0.6248 |
| AF-M0RC58-F1-model_v4 | 1 | 560 | 121 | 773 | 0.5289 |
0.6243 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518B1Q4-F1-model_v4 | GT83 | 2 | 561 | 8 | 486 | 0.6544 |
0.7375 |
| AF-A0A518AYL4-F1-model_v4 | GT83 | 2 | 561 | 5 | 485 | 0.6426 |
0.7174 |
| AF-D5EJZ3-F1-model_v4 | GT83 | 1 | 560 | 19 | 503 | 0.6407 |
0.7242 |
| AF-A0A2P1PXF2-F1-model_v4 | GT83 | 3 | 560 | 16 | 486 | 0.6395 |
0.729 |
| UAB91770.1 | GT89 | 1 | 561 | 6 | 521 | 0.6389 |
0.7041 |
| AF-A0A518N6I7-F1-model_v4 | GT83 | 1 | 561 | 4 | 496 | 0.6372 |
0.7044 |
| AF-A0A2L0N2L3-F1-model_v4 | GT83 | 1 | 559 | 8 | 510 | 0.6369 |
0.6995 |
| AF-A0A2U8FZ99-F1-model_v4 | GT83 | 3 | 558 | 7 | 491 | 0.6369 |
0.7083 |
| AF-A0A249PQC4-F1-model_v4 | GT83 | 3 | 558 | 7 | 491 | 0.6365 |
0.7084 |
| A0A974YQD1 | GT83 | 3 | 559 | 7 | 496 | 0.6358 |
0.7051 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518B1Q4 | GT83 | 2 | 561 | 8 | 486 | 0.6544 |
0.7375 |
| A0A517YV87 | GT83 | 3 | 559 | 4 | 485 | 0.6522 |
0.7238 |
| UCV14583.1 | GT83 | 2 | 561 | 12 | 488 | 0.6498 |
0.7299 |
| A0A9Q4LCB9 | GT83 | 1 | 561 | 12 | 489 | 0.6488 |
0.7271 |
| WED42327.1 | GT83 | 1 | 559 | 5 | 460 | 0.6463 |
0.7413 |
| A0A075WTA5 | GT83 | 4 | 559 | 3 | 458 | 0.6436 |
0.7297 |
| A0A974TGW9 | GT83 | 3 | 559 | 11 | 498 | 0.6427 |
0.7151 |
| A0A518AYL4 | GT83 | 2 | 561 | 5 | 485 | 0.6426 |
0.7174 |
| A0A0W0Z9P3 | GT83 | 1 | 559 | 15 | 477 | 0.6412 |
0.7321 |
| D5EJZ3 | GT83 | 1 | 560 | 19 | 503 | 0.6407 |
0.7242 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9BV10-F1-model_v4 | 2 | 560 | 4 | 487 | 0.6008 |
0.6664 |
| AF-Q8MXQ3-F1-model_v4 | 1 | 561 | 108 | 661 | 0.5629 |
0.6839 |
| AF-Q2PZI1-F1-model_v4 | 1 | 561 | 20 | 675 | 0.5585 |
0.6251 |
| AF-A8Y3M2-F1-model_v4 | 1 | 559 | 28 | 687 | 0.5571 |
0.6293 |
| AF-P34413-F1-model_v4 | 1 | 559 | 25 | 683 | 0.553 |
0.6241 |
| AF-A6X919-F1-model_v4 | 1 | 561 | 67 | 746 | 0.538 |
0.6254 |
| AF-P0CW70-F1-model_v4 | 1 | 560 | 121 | 773 | 0.5293 |
0.6248 |