dbCAN Logo

Cluster: Rep_2197_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2197_c_18 Rep_2197_c_18_2 313 1767 + 3.A.1.1.10
TC Rep_2197_c_18 Rep_2197_c_18_3 1780 2751 + 3.A.1.1.29
NULL(UNKNOWN) Rep_2197_c_18 Rep_2197_c_18_4 2788 4515 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2197_c_18 Rep_2197_c_18_5 4623 5288 + 9.B.28.1.2
peptidase Rep_2197_c_18 Rep_2197_c_18_6 5330 6148 + S09.UPW
TC Rep_2197_c_18 Rep_2197_c_18_7 6179 6538 + 9.B.55.2.1
CAZyme Rep_2197_c_18 Rep_2197_c_18_8 6624 9380 + GH5_4
TF Rep_2197_c_18 Rep_2197_c_18_9 9471 11036 - HTH_AraC | HTH_AraC
TC Rep_2197_c_18 Rep_2197_c_18_10 11283 13007 - 3.A.1.1.29
TC Rep_2197_c_18 Rep_2197_c_18_11 13036 13932 - 3.A.1.1.29
TC Rep_2197_c_18 Rep_2197_c_18_12 13948 14892 - 3.A.1.1.29
Gene ID: Rep_2197_c_18_2
Type: TC
Location: 313 - 1767 (+)
Gene ID: Rep_2197_c_18_3
Type: TC
Location: 1780 - 2751 (+)
Gene ID: Rep_2197_c_18_4
Type:
Location: 2788 - 4515 (+)
Gene ID: Rep_2197_c_18_5
Type: TC
Location: 4623 - 5288 (+)
Gene ID: Rep_2197_c_18_6
Type: peptidase
Location: 5330 - 6148 (+)
Gene ID: Rep_2197_c_18_7
Type: TC
Location: 6179 - 6538 (+)
Gene ID: Rep_2197_c_18_8
Type: CAZyme
Location: 6624 - 9380 (+)
Gene ID: Rep_2197_c_18_9
Type: TF
Location: 9471 - 11036 (-)
Gene ID: Rep_2197_c_18_10
Type: TC
Location: 11283 - 13007 (-)
Gene ID: Rep_2197_c_18_11
Type: TC
Location: 13036 - 13932 (-)
Gene ID: Rep_2197_c_18_12
Type: TC
Location: 13948 - 14892 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
CAG-510
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List