PROTEIN: Rep_2197_c_18_4
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Protein File & Metadata
Source:
Rep_2197_c_18_4.pdb
Genome ID:
Protein ID:
Rep_2197_c_18_4
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Protein Sequence
MKKMKRIVAL ALTLIMVSGL LTGCGSKDKD LITLTIYSQL ANYSGEMQGW FAQILKDRFG 60 VKVNLIPDGD GVFDTRMEAG DLGDIVVWGS DDKDYVQAVS AGLLYDWEED NLVQEYGPYI 120 WEHMQDALNK NKIVSAPKDA DGNVIGEANT IYGFGHNVAS SSDSHEAFFY TWDIRWDLYQ 180 QLGHPEVNDL DDLMDVLIAM KEICPTADNG KPTYAMSLWP DWDGNYVMYV KAMATAYYGY 240 DEFGFGHYNV RTGEYYDALS PDSPYLEMLA WFNELYRNGL LDPDSMTQTY DNMIEKVQNG 300 QTFFSIFNYA GSLAYNKETH YGQDEEGNEI NKIMESLVPT EACPIVGGLS TLGGNRVWSI 360 GAKTQYPELC MEIINWLCTP EGRLTIDYGP KGVCWDYDEN GKTYFTEFGK TCFEDRTTLM 420 PNEWGGATFN EGAFQVNNLT WSSADINPES GERYDQQYWA SNLVPEGRCD AERDWREYTG 480 YNTLEEYMDS CNYVVDVPTT FSFAERDPQL ESTWVQVATC LKDYSWRAIY AETEEEFQAI 540 VNEMRGRAKS YGYDACTQWS IEQAAIKNEL QAPLR 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 4 | 570 | 28 | 502 | 0.6584 |
0.7566 |
| AF-A0A133D019-F1-model_v4 | 29 | 570 | 35 | 485 | 0.6385 |
0.7545 |
| AF-Q8DRJ6-F1-model_v4 | 28 | 575 | 59 | 514 | 0.5831 |
0.7025 |
| AF-Q8DNU2-F1-model_v4 | 1 | 563 | 23 | 445 | 0.5727 |
0.6895 |
| AF-Q8DNH8-F1-model_v4 | 27 | 563 | 29 | 419 | 0.565 |
0.7067 |
| AF-A0A0H3GX53-F1-model_v4 | 9 | 563 | 19 | 428 | 0.563 |
0.684 |
| AF-Q9I1E0-F1-model_v4 | 27 | 563 | 17 | 436 | 0.56 |
0.6737 |
| AF-A0A133CPC5-F1-model_v4 | 6 | 560 | 28 | 423 | 0.5593 |
0.6964 |
| AF-A0A132Z3C8-F1-model_v4 | 21 | 559 | 23 | 428 | 0.5584 |
0.6845 |
| AF-K0F002-F1-model_v4 | 8 | 560 | 45 | 439 | 0.5512 |
0.6993 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 1 | 573 | 32 | 506 | 0.6626 |
0.7641 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 29 | 565 | 27 | 742 | 0.4398 |
0.5366 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 1 | 573 | 32 | 506 | 0.6626 |
0.7641 |
| K8EJG7 | CBM50 , CE4 | 6 | 562 | 29 | 416 | 0.5352 |
0.6739 |
| A0A7U1BNH7 | GH10 | 29 | 565 | 27 | 742 | 0.4398 |
0.5366 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 31 | 570 | 1 | 474 | 0.7399 |
0.8262 |
| 5g62-assembly2.cif.gz_B | 32 | 575 | 1 | 491 | 0.7201 |
0.7936 |
| 6fth-assembly1.cif.gz_A | 8 | 573 | 2 | 496 | 0.7187 |
0.7893 |
| 3omb-assembly1.cif.gz_A | 6 | 573 | 1 | 503 | 0.7176 |
0.7819 |
| 4tqu-assembly1.cif.gz_Q | 11 | 574 | 1 | 492 | 0.7136 |
0.7872 |
| 6jhx-assembly2.cif.gz_B | 12 | 570 | 1 | 483 | 0.71 |
0.788 |
| 3vlw-assembly2.cif.gz_B | 12 | 572 | 1 | 489 | 0.7091 |
0.7835 |
| 5g5y-assembly1.cif.gz_A | 8 | 575 | 1 | 494 | 0.685 |
0.7566 |
| 5suo-assembly1.cif.gz_A | 31 | 573 | 1 | 451 | 0.6689 |
0.7655 |
| 5swa-assembly1.cif.gz_A | 32 | 570 | 1 | 448 | 0.6258 |
0.7204 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 4 | 575 | 33 | 538 | 0.684 |
0.7675 |
| AF-P37966-F1-model_v4 | 4 | 569 | 27 | 502 | 0.6812 |
0.7813 |
| AF-Q795R2-F1-model_v4 | 2 | 569 | 28 | 498 | 0.651 |
0.7521 |
| AF-Q2YKZ9-F1-model_v4 | 29 | 560 | 22 | 411 | 0.5932 |
0.7369 |
| AF-Q8FVS7-F1-model_v4 | 29 | 560 | 22 | 411 | 0.5929 |
0.7362 |
| AF-Q578M8-F1-model_v4 | 29 | 563 | 22 | 411 | 0.5929 |
0.7361 |
| AF-A0A0H2UMY0-F1-model_v4 | 27 | 575 | 34 | 491 | 0.5879 |
0.6933 |
| AF-O06875-F1-model_v4 | 27 | 563 | 25 | 421 | 0.5571 |
0.6908 |
| AF-O34335-F1-model_v4 | 28 | 560 | 26 | 417 | 0.5571 |
0.7013 |
| AF-Q8YCE2-F1-model_v4 | 27 | 563 | 25 | 421 | 0.5568 |
0.6902 |